| Common name: | |
| Defline: | (1 of 2) PF12325 - TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) |
| Description: | |
| Synonyms: | g9973.t1,Cre02.g138250.t1.1 |
| Chromosome: | chromosome 9 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.034706_1 | CLIP2.034706 | intron | 80 | 6.1 |
| CLIP2.034706_2 | CLIP2.034706 | intron | 80 | 6.1 |
| CLIP2.054326_1 | CLIP2.054326 | intron | 80 | 6.1 |
| CLIP2.066071_2 | CLIP2.066071 | intron | 63 | 6.1 |
| CLIP2.074350_1 | CLIP2.074350 | 3'UTR | 80 | 6.1 |
| CLIP2.074350_2 | CLIP2.074350 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.044913_1 | LMJ.RY0402.044913 | intron | 73 | 5.5 |
| LMJ.RY0402.052976_1 | LMJ.RY0402.052976 | intron | 73 | 5.5 |
| LMJ.RY0402.109100_1 | LMJ.RY0402.109100 | CDS | 58 | 5.5 |
| LMJ.RY0402.158811_1 | LMJ.RY0402.158811 | intron | 73 | 5.5 |
| LMJ.RY0402.161353_1 | LMJ.RY0402.161353 | CDS | 95 | 5.5 |
| LMJ.RY0402.161353_2 | LMJ.RY0402.161353 | CDS | 95 | 5.5 |
| LMJ.RY0402.241718_1 | LMJ.RY0402.241718 | intron | 73 | 5.5 |
| PFAM: | PF12325 |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT1G79830.1 |
| Best arabidopsis TAIR symbol: | GC5 |
| Best arabidopsis TAIR defline: | golgin candidate 5 |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| LAT042F05, screen 1 of 1 ( 73% confidence (FDR = 0.27)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.