Insertion junction: CLIP2.066071_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066071
Chromosome:chromosome 9
Location:4469702
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g400812 (1 of 2) PF12325 - TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTGCCAATGCTGCAGCTGCCCGTTTCCCAGCCTCGAGCTCTGGCCCC
Internal bar code:CGGTGAATCCCAATTGGGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1093
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAGACAGCTAGAGGTGG
Suggested primer 2:AGACAGTTCGCGTTGGTGAT