Insertion junction: LMJ.RY0402.109100_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.109100
Chromosome:chromosome 9
Location:5572960
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g400812 (1 of 2) PF12325 - TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGCGGCACCAGCAGCTCCTCCAACACG
Internal bar code:CAGGGCCGTCGGGTGGGGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:264
LEAP-Seq percent confirming:98.8571
LEAP-Seq n confirming:519
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGCTGGTTTGTGTGATT
Suggested primer 2:CGGGGAACACTTGTCTCAAT