Insertion junction: CLIP2.054338_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054338
Chromosome:chromosome 10
Location:1643766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429450 (1 of 25) IPR001005//IPR009057//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAGGCAGCGGTTCCGTCAAAAGCCGCTGCAGCTGCTGATATCGGCGG
Internal bar code:TCGATCGTTAGCAGTGGCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1412
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCCTAGACGACATCGAC
Suggested primer 2:TGCTGCCAGTGGGTTATCAG