Insertion junction: CLIP2.054349_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054349
Chromosome:chromosome 13
Location:1490873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572500 COA2,CGL14 (1 of 1) PTHR12280//PTHR12280:SF31 - PANTOTHENATE KINASE // SUBFAMILY NOT NAMED; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTATGCACATGATGCTTACGGCGCAGCTGATCAGCGCGTGCAGACCGG
Internal bar code:CTTGATCTGTGCAGGGTTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2812
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACATGCCCTGACAGACA
Suggested primer 2:GCTAGCACCCGGTCATAGTC