Insertion junction: CLIP2.054405_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054405
Chromosome:chromosome 12
Location:7666065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555200 (1 of 1) PF09786 - Cytochrome B561, N terminal (CytochromB561_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGGCGTCTGCAGGGTGGAAGGGGGATAGCACAGTTAGCGCGGGCCA
Internal bar code:GACGCTGCCCGATTTCGTGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1946
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAACACTGTCAGCACGG
Suggested primer 2:CAAGGCCTACAGTCACAGCA