Insertion junction: CLIP2.054421_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054421
Chromosome:chromosome 11
Location:3785244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479300 SRH20 SNF2-related DNA/RNA helicase; (1 of 1) K15083 - DNA repair protein RAD16 (RAD16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGAGGGGTAGATAGGAAGCGAGTGGAGCGGGTGGTTGCATTTGCTTG
Internal bar code:GGTATGAAGCTCCGTTAGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:735
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTGCAACATGTTTCGG
Suggested primer 2:CTGGTGTGCTGTTGTGTTGG