Insertion junction: CLIP2.054604_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054604
Chromosome:chromosome 3
Location:5495429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184651 RAD51D DNA recombination protein; (1 of 1) PTHR22942:SF29 - DNA REPAIR PROTEIN RAD51 HOMOLOG 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGACGGCACTTGGGCCCTCGCAGTCGAGGCGTTCCTCGTCAGCTGCA
Internal bar code:CGCTTTTGCGTATCTTGTTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3067
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTCCACGAACATCACCT
Suggested primer 2:GTAAGAGCACGAAACCGGGA