Gene: Cre03.g184651

Overview

Common name:RAD51D
Defline:DNA recombination protein; (1 of 1) PTHR22942:SF29 - DNA REPAIR PROTEIN RAD51 HOMOLOG 4
Description:Homologous to recA and RAD51; most similar to Arabidopsis RAD51D and human TRAD
Synonyms:RAD51D,g3827.t1,Cre03.g184650.t1.3
Chromosome:chromosome 3

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.024584_1 CLIP2.024584 CDS 80 6.1
CLIP2.033516_1 CLIP2.033516 CDS 80 6.1
CLIP2.054604_1 CLIP2.054604 CDS 80 6.1
CLIP2.063408_1 CLIP2.063408 3'UTR 80 6.1
CLIP2.063408_2 CLIP2.063408 3'UTR 80 6.1
CLIP2.068946_1 CLIP2.068946 outside_mRNA 80 6.1
CLIP2.068946_2 CLIP2.068946 outside_mRNA 80 6.1
CLIP2.069090_1 CLIP2.069090 outside_mRNA 80 6.1
CLIP2.069090_2 CLIP2.069090 outside_mRNA 80 6.1
CLIP2.069831_1 CLIP2.069831 3'UTR 80 6.1
CLIP2.070705_1 CLIP2.070705 outside_mRNA 80 6.1
CLIP2.070705_2 CLIP2.070705 outside_mRNA 80 6.1
CLIP2.075319_1 CLIP2.075319 3'UTR 80 6.1
LMJ.RY0402.097387_1 LMJ.RY0402.097387 5'UTR_intron 73 5.5
LMJ.RY0402.125046_1 LMJ.RY0402.125046 5'UTR_intron 95 5.5
LMJ.RY0402.125046_2 LMJ.RY0402.125046 5'UTR_intron 95 5.5
LMJ.RY0402.170633_1 LMJ.RY0402.170633 3'UTR 73 5.5
LMJ.RY0402.196268_1 LMJ.RY0402.196268 3'UTR 58 5.5
LMJ.RY0402.230158_1 LMJ.RY0402.230158 5'UTR_intron 95 5.5
LMJ.RY0402.230158_2 LMJ.RY0402.230158 5'UTR_intron 95 5.5

Gene Annotations

PFAM:PF08423
PANTHER: PTHR22942 PTHR22942:SF29
KEGG_ec:EC:3.6.1.8
KEGG_orthology:
KOG:
Gene ontology terms::GO:0003677, GO:0005524, GO:0006281, GO:0008094
Best arabidopsis TAIR name:AT1G07745
Best arabidopsis TAIR symbol:ATRAD51D,RAD51D,SSN1
Best arabidopsis TAIR defline:homolog of RAD51 D
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Cisplatin, screen 2 of 4 ( 99% confidence (FDR = 9.5e-05))
Cisplatin, screen 3 of 4 ( 99% confidence (FDR = 0.00025))
Cisplatin, screen 4 of 4 ( 99% confidence (FDR = 0.00052))
Methyl methanesulfonate, screen 3 of 4 ( 99% confidence (FDR = 0.00058))
Methyl methanesulfonate, screen 4 of 4 ( 99% confidence (FDR = 0.00019))
Zeocin, screen 5 of 5 ( 95% confidence (FDR = 0.041))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.