Insertion junction: CLIP2.068946_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068946
Chromosome:chromosome 3
Location:5492701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184651 RAD51D DNA recombination protein; (1 of 1) PTHR22942:SF29 - DNA REPAIR PROTEIN RAD51 HOMOLOG 4 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGCAAAGTTATGCATCGCTTGGGACAAGTTGAAAGGCGTATTATTTG
Internal bar code:AAATAGTGGTTTCTCATGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1931
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGCTTCTGGTAGCCATG
Suggested primer 2:CCACAGCGCATTCATACACG