Insertion junction: CLIP2.070705_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070705
Chromosome:chromosome 3
Location:5495886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184651 RAD51D DNA recombination protein; (1 of 1) PTHR22942:SF29 - DNA REPAIR PROTEIN RAD51 HOMOLOG 4 outside_mRNA
Cre03.g184700 (1 of 1) PTHR31810//PTHR31810:SF6 - FAMILY NOT NAMED // METACASPASE-4-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAAATCATGAAGAGCGGGAATGAAGTCAATCAATACTCGTGAGTTCC
Internal bar code:TGCCGTTTTGCTCGCTGGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3508
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAACCCAACTGCAGCTC
Suggested primer 2:GACAGAACGAGGCACCTTCA