Insertion junction: CLIP2.069090_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069090
Chromosome:chromosome 3
Location:5491964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184651 RAD51D DNA recombination protein; (1 of 1) PTHR22942:SF29 - DNA REPAIR PROTEIN RAD51 HOMOLOG 4 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCAAGCTGCTGCCCACAACTGACGAGTTTGCCAACTTGGATTCAAC
Internal bar code:ATCGCCTGAGATATATCATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:291
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCATACTATCGTGGTGGCGA
Suggested primer 2:CAAGCAACGGACCTGGTTTG