Insertion junction: CLIP2.054748_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054748
Chromosome:chromosome 12
Location:3137513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500700 LCL2 (1 of 125) IPR001841 - Zinc finger, RING-type; Long-chain-fatty-acid-CoA ligase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTAGTGCGGCCAGGCGCGCCCTCTCACGGACCTGAGCCGCCTCCACGT
Internal bar code:GCATTCAGATTTAACGGGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2234
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGCACGTAACTTATGTG
Suggested primer 2:ACACCCACACACCAACACAT