Insertion junction: CLIP2.054753_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.054753
Chromosome:chromosome 14
Location:536265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611450 PLP7,PLAP7 Plastid lipid associated protein 7; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGAAGGTGCGGGGAGGGGGTTGGTAGATAGCAGCCAGAACTAAGGGG
Internal bar code:TCCTTTAAAGGTTTAACGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1399
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGGTTGTAGCGGCAGTA
Suggested primer 2:TGTTGGACAACGAGGACGAG