Insertion junction: CLIP2.054842_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054842
Chromosome:plastome
Location:67517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802292 ccsA,ChreCp028,2717027,ycf5 (1 of 1) PTHR30071//PTHR30071:SF8 - HEME EXPORTER PROTEIN C // CYTOCHROME C BIOGENESIS PROTEIN CCSA; cytochrome c biogenesis protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTTTATACTGCATTTTACAGTACAAATCCTCAACAAATTATAAATCC
Internal bar code:CGGCATCAAAGGTTGAGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1202
LEAP-Seq percent confirming:54.0984
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATTAGCCCACACAGCCC
Suggested primer 2:CCGTTCTTGTGCGAACAAGG