Insertion junction: CLIP2.054911_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054911
Chromosome:chromosome 12
Location:4147438
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517400 RABF1,RAB5 (1 of 1) K07889 - Ras-related protein Rab-5C (RAB5C); RAB-like GTP-Binding Protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCGGTGTGCAGGGACACGGCCGGTCAGGAGCGCTACCACAGCCTCGC
Internal bar code:TTGCCCCCTTCACTCAGTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1341
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCTGGTTCTCTGACAG
Suggested primer 2:ACAAGCCTCTGACAGCAGAC