Gene: Cre12.g517400 (Genome version: v5.5)
Overview
| Common name: | RAB5,RABF1 |
| Defline: | Small Rab-related GTPase |
| Description: | Expressed Protein. Similar to the RabF/Rab5 type of small GTPase, involved in vesicle trafficking in the endosomal system; Found in the flagellar proteome [PMID: 15998802]. Previously annotated as RABF1 |
| Synonyms: | g12759.t1,Cre12.g517400.t1.1,RAB5,RABF1 |
| Chromosome: | chromosome_12 |
Protein Localization
A plasmid for expressing Cre12.g517400 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g517400-Venus-3xFLAG
Imaged strain: CSI_LW12C3
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Orientation | Insertion Junction Feature | Confidence (%) |
|---|---|---|---|---|
| LMJ.RY0402.186680_1 | LMJ.RY0402.186680 | antisense | 3'UTR | 73 |
| LMJ.RY0402.202444_4 | LMJ.RY0402.202444 | antisense | 3'UTR | 73 |
| LMJ.RY0402.237893_1 | LMJ.RY0402.237893 | antisense | 5'UTR | 95 |
| LMJ.RY0402.237893_2 | LMJ.RY0402.237893 | antisense | 5'UTR | 95 |
Gene Annotations
| PFAM: | PF00071 |
| PANTHER: | PTHR24073 PTHR24073:SF254 |
| KEGG_ec: | |
| KEGG_orthology: | K07976 |
| KOG: | KOG0092 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT4G19640.1 |
| Best arabidopsis TAIR symbol: | ARA-7,ARA7,ATRAB-F2B,ATRAB5B,ATRABF2B,RAB-F2B,RABF2B |
| Best arabidopsis TAIR defline: | Ras-related small GTP-binding family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.