Insertion junction: CLIP2.055022_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055022
Chromosome:chromosome 6
Location:1556353
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261026 (1 of 1) IPR001478//IPR014756 - PDZ domain // Immunoglobulin E-set CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACCACCAGTGCCGCCGGCTTTGCTACAGCCGCCACCGGCCTCGGCG
Internal bar code:TCGTGGATCGGATTCGAGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:402
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGCCTACACACAGCACA
Suggested primer 2:GTTTGGGCTACGTGTCAGGA