Insertion junction: CLIP2.055034_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055034
Chromosome:chromosome 2
Location:6195084
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g120250 CDPK7,STT7 (1 of 3) PTHR11584:SF316 - SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC; Chloroplast protein kinase required for state transitions CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCCGATGCGCAGGTCGGCGGCGGCGCCCAGGTCAATCAGCTTGATC
Internal bar code:TTGTTGACCCGTAAAGGCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACAACCTGGAGCCACTG
Suggested primer 2:CTATCACGCCTCAGACACCC