Insertion junction: CLIP2.055207_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055207
Chromosome:chromosome 3
Location:4618211
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g176833 NAP1,NAP,DII5 (1 of 7) PF00022 - Actin (Actin); Novel actin protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACATGTCACAGTAGTCGGCAGCCTCTCAACTCGAGCCTGACGACCTGC
Internal bar code:TGCCTTTCGGTTCATCGTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:32.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAACGAGGGTTGAGGGAG
Suggested primer 2:AGGTTTCTCCATGCCTCACG