Insertion junction: CLIP2.056165_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056165
Chromosome:chromosome 3
Location:8675752
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g209281 (1 of 1) IPR000547//IPR001680//IPR011990//IPR015943//IPR017986 - Clathrin, heavy chain/VPS, 7-fold repeat // WD40 repeat // Tetratricopeptide-like helical domain // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCTTAAATGTGTGCAGTATTGTGTGGAAAAGAGACAAGCGGGTCGGG
Internal bar code:GCTGACTCATATTGTGTGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1135
LEAP-Seq percent confirming:34.4828
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTCGTTCTTGGTTGCTT
Suggested primer 2:GGTATAGGTGCGTGTGGAGG