Insertion junction: CLIP2.056325_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056325
Chromosome:chromosome 3
Location:4637253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176930 (1 of 4) PF03134 - TB2/DP1, HVA22 family (TB2_DP1_HVA22) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCAACCCTCCAAACCCGACCCAACAATAGGCCTCCGAACAGAGCAC
Internal bar code:GGATAGTCACTGTCTCGAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:893
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCCCGCATGATCTATGA
Suggested primer 2:CAGAAGCGCATGCAAGCTAG