Insertion junction: CLIP2.056355_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056355
Chromosome:chromosome 2
Location:6801049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388097 TOC80,OEP80 Putative outer membrane chloroplast protein; (1 of 2) K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGAGAGGCAACAGCTCGGAGTAAAGGGGCCACATGGAGCTCAGGGTCT
Internal bar code:TGCAATTTAGAGTGACAAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1948
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACAGGTACGTCTTGGTC
Suggested primer 2:ACGTCTATTGCAGCCCCAAA