Insertion junction: CLIP2.056467_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056467
Chromosome:chromosome 1
Location:4668850
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032300 GBP1 G-strand telomere DNA binding protein; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGTATATGTGGCAAGGAACGGGCGCGGGAAAGATTCGCGGCAAGAAT
Internal bar code:TGAAACGGATGGGTAAGCCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2814
LEAP-Seq percent confirming:80.3571
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGATACCCCGAGTGCATG
Suggested primer 2:ACGTCTGACTTCTGTGCAGG