Insertion junction: CLIP2.056863_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056863
Chromosome:chromosome 3
Location:1456791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151250 LANC1,LAN1 (1 of 1) PF05147 - Lanthionine synthetase C-like protein (LANC_like); LanC lantibiotic synthetase component C-like protein 3'UTR
Cre03.g151300 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATGTGTAGCAATTCAAGCTGGAGAGTGGTTAGGAGGAACAAGTTCAA
Internal bar code:GGAGTCAGTGGCAGAATCCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5390
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTTTCTTCGACAGGGGGC
Suggested primer 2:CTGTTCCCATTCCCATGCCT