Insertion junction: CLIP2.056886_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056886
Chromosome:chromosome 3
Location:6602297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800367 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTATCTGTGCGTGCAAGTCAACTTCTAACATTCTGCATAAGAAACCA
Internal bar code:GGGAGCTATGTTGCAGTATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2229
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGAGGATACCCGGTCACA
Suggested primer 2:CATGGTAGTTGCCAGGACGT