Insertion junction: CLIP2.057042_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057042
Chromosome:chromosome 3
Location:1926829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155051 SPA1 Sphinganine-1-phosphate aldolase/lyase; (1 of 1) 4.1.2.27 - Sphinganine-1-phosphate aldolase / Sphingosine-1-phosphate lyase CDS
Cre03.g155100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCAAAGGCTGCTGATGCTGCAAACAAAGCGTATGATCAAGCAGCACC
Internal bar code:GGTTGTTGGCGCTTCCTAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1443
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGACGCATCTTGGCCTT
Suggested primer 2:CTTCATCGTCTCCTCCTCGC