Insertion junction: CLIP2.057046_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057046
Chromosome:chromosome 1
Location:2668002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016050 PRP8 (1 of 1) K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8); Splicing factor, component of the U5 snRNP and of the spliceosome 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGACAGAGCGCTCAGGCCTGCGTGCTTGGCCGGATCAACGCAAACATT
Internal bar code:ACCATATGAGAAGCAATGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1554
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGTGACGAGTAGAGGT
Suggested primer 2:TTGGGACACCTTACGCAGTC