Insertion junction: CLIP2.057115_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057115
Chromosome:chromosome 9
Location:5337980
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g407700 CEP1 (1 of 1) K16292 - KDEL-tailed cysteine endopeptidase [EC:3.4.22.-] (CEP, CYSEP); Cysteine endopeptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTTTGGTGGACACGCTTATTTCGGTTGCGGTCCTCGTCGTTACGTTCC
Internal bar code:ATTAGCTGGGGTACTGCTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGCGTAGTCCATCAGGC
Suggested primer 2:AGAACCGCTTCAAGGTCTGG