Insertion junction: CLIP2.057194_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057194
Chromosome:chromosome 12
Location:1432465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488450 VSP3 (1 of 5) PTHR16631:SF9 - GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall glycoprotein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACACTCTCCGATACCCTCCCCGTCGCTTTTCCATTCCTCGCGACCCCG
Internal bar code:CCATACACAATGTGTAACGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1066
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTTAGGCGGGCAGACACTAG
Suggested primer 2:GGCACTGTTGTTCTTTGCGT