Insertion junction: CLIP2.057222_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057222
Chromosome:chromosome 12
Location:543283
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g494100 SPL19 Pre-mRNA splicing factor; (1 of 1) K12828 - splicing factor 3B subunit 1 (SF3B1, SAP155) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGACAAGGATTCATCAAGACGCGGATTATGCCCAGTCCCAAGGACATG
Internal bar code:TGTGGTGATCGATGTCGCCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCATCTCCTAACCCCA
Suggested primer 2:CACACCCGGTATCAACCCTC