Gene: Cre12.g494100

Overview

Common name:SPL19
Defline:Pre-mRNA splicing factor; (1 of 1) K12828 - splicing factor 3B subunit 1 (SF3B1, SAP155)
Description:Splicing factor 3B subunit 1-related protein
Synonyms:SPL19,g12067.t1
Chromosome:chromosome 12

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

Bait ID Bait Name Prey ID Prey Name Reference
Cre06.g278195 CTI,CTI1 Cre12.g494100 SPL19 Wang et al. 2023

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.057222_1 CLIP2.057222 intron 63 6.1
CLIP2.071042_1 CLIP2.071042 CDS 63 6.1
CLIP2.078499_2 CLIP2.078499 intron 63 6.1
CLIP2.079176_1 CLIP2.079176 CDS 40 6.1
LMJ.RY0402.219264_1 LMJ.RY0402.219264 3'UTR 73 5.5
LMJ.RY0402.236806_1 LMJ.RY0402.236806 3'UTR 95 5.5
LMJ.RY0402.236806_2 LMJ.RY0402.236806 3'UTR 95 5.5

Gene Annotations

PFAM:PF08920
PANTHER: PTHR12097
KEGG_ec:
KEGG_orthology:K12828
KOG:KOG0213
Gene ontology terms::GO:0005488
Best arabidopsis TAIR name:AT5G64270
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:splicing factor, putative
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.