Insertion junction: CLIP2.078499_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078499
Chromosome:chromosome 12
Location:548026
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g494100 SPL19 Pre-mRNA splicing factor; (1 of 1) K12828 - splicing factor 3B subunit 1 (SF3B1, SAP155) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCCCAAAACACACACCTGTCGATGACCTTGACCAGCAGGTGCCGCTC
Internal bar code:GGGTGGGGTTGCGCTTAAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGGGTCATGTGTGTTTG
Suggested primer 2:CTGCTGCACGATCTTGATGC