Insertion junction: CLIP2.057331_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057331
Chromosome:chromosome 12
Location:2657286
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g505550 HTA17,HTA28 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCAACGCAGCCCGCGACAACAAGAAGAACCGCATCGTGCCCCGTCAC
Internal bar code:AGTTACTTAGAGACCTTTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2389
LEAP-Seq percent confirming:3.0303
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGAGCTGGCTAGAGTGC
Suggested primer 2:GAGCGGTTGTTTGACCCAAC