Insertion junction: CLIP2.057528_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057528
Chromosome:chromosome 12
Location:9325496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542050 3'UTR
Cre12.g542100 (1 of 2) 3.4.21.26 - Prolyl oligopeptidase / Prolyl endopeptidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
Internal bar code:ATTGACGATGCAGACGATATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:1.35135
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:73
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACGAGTTAAGTCGGCGT
Suggested primer 2:ATCTTCAAGCCGAGGGTGTG