Insertion junction: CLIP2.057534_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057534
Chromosome:chromosome 4
Location:3081484
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g225400 (1 of 79) IPR011992 - EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCCCCGCCCCAACCGCCCCACCCAGACCCCCAATCCCAAGCCCCCGT
Internal bar code:GAGTTGAAGAGATGGACAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:138
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGACTGCTGGACTTCAAC
Suggested primer 2:CATCGCAATCTCCGCCTTTG