Insertion junction: CLIP2.057586_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057586
Chromosome:chromosome 16
Location:7800841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g688190 (1 of 6) PTHR10527 - IMPORTIN BETA outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGCGAGCTTACATATTATGTTCATCCTGGTAGGAGCAAGCTTACAC
Internal bar code:GTGTTGCATTAGTATGTGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1239
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGCGCCTTTAGACGTCA
Suggested primer 2:CGGGGGTTGCCTTCATAACT