Insertion junction: CLIP2.057814_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057814
Chromosome:plastome
Location:66631
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802292 ccsA,ChreCp028,2717027,ycf5 (1 of 1) PTHR30071//PTHR30071:SF8 - HEME EXPORTER PROTEIN C // CYTOCHROME C BIOGENESIS PROTEIN CCSA; cytochrome c biogenesis protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATTGCCGGTTTTTCACCTTCCCAACCTTTTGTTAAACGGGTATGTAGA
Internal bar code:TCAGTAACACAATTGTCCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:111
LEAP-Seq percent confirming:42.4242
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCTGTTGGGTGTTTCTT
Suggested primer 2:CTGTGCAGCCCCAAAGTAGA