Insertion junction: CLIP2.057927_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057927
Chromosome:chromosome 3
Location:2348532
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g158250 SCY2,SECY2 (1 of 1) PTHR10906:SF2 - PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC; Preprotein translocase secY subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGCGGGGATGTCCTGCGCCTGCCCGTACAGCGCCTTGATCAGCCGC
Internal bar code:GTTACCTAAAGCGGAGTGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATCTCCCCTCCACTGTA
Suggested primer 2:CATTTACCCTGCCAGCCAGA