| Insertion cassette: | CIB2 |
| Side of cassette: | 3' |
| Strand: | - |
| Strain: | CLIP2.058238 |
| Chromosome: | chromosome 13 |
| Location: | 4776427 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre13.g604501 | (1 of 1) IPR003613//IPR011050 - U box domain // Pectin lyase fold/virulence factor | 3'UTR | |
| Cre13.g604550 | (1 of 8) PF14580 - Leucine-rich repeat (LRR_9) | 3'UTR |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | TGGATGGATGGAGACATGAAACGACTGCTGCTGGGACTCACAGCTTGCGC |
| Internal bar code: | CTTTGTGGTCACGCGTGGTGAT |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 3115 |
| LEAP-Seq percent confirming: | 100.0 |
| LEAP-Seq n confirming: | 10 |
| LEAP-Seq n nonconfirming: | 0 |
| LEAP-Seq n unique pos: | 10 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | ACAGTGCGAGTGACCAGATG |
| Suggested primer 2: | CGATTGCTGCGTCGTTACAG |