Gene: Cre13.g604501

Overview

Common name:
Defline:(1 of 1) IPR003613//IPR011050 - U box domain // Pectin lyase fold/virulence factor
Description:
Synonyms:g14583.t1
Chromosome:chromosome 13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.001200_1 CLIP2.001200 CDS 80 6.1
CLIP2.001200_2 CLIP2.001200 CDS 80 6.1
CLIP2.001364_1 CLIP2.001364 CDS 80 6.1
CLIP2.001364_2 CLIP2.001364 CDS 80 6.1
CLIP2.004746_1 CLIP2.004746 intron 80 6.1
CLIP2.004746_2 CLIP2.004746 intron 80 6.1
CLIP2.004819_1 CLIP2.004819 CDS 80 6.1
CLIP2.004819_2 CLIP2.004819 CDS 80 6.1
CLIP2.006987_1 CLIP2.006987 CDS 80 6.1
CLIP2.006987_2 CLIP2.006987 CDS 80 6.1
CLIP2.058238_1 CLIP2.058238 3'UTR 80 6.1
CLIP2.058238_2 CLIP2.058238 3'UTR 80 6.1
LMJ.RY0402.040001_1 LMJ.RY0402.040001 CDS 95 5.5
LMJ.RY0402.040001_2 LMJ.RY0402.040001 CDS 95 5.5
LMJ.RY0402.058724_1 LMJ.RY0402.058724 CDS 73 5.5
LMJ.RY0402.107407_1 LMJ.RY0402.107407 3'UTR 95 5.5
LMJ.RY0402.107407_2 LMJ.RY0402.107407 3'UTR 95 5.5
LMJ.RY0402.131776_1 LMJ.RY0402.131776 CDS 73 5.5
LMJ.RY0402.137447_1 LMJ.RY0402.137447 3'UTR 73 5.5
LMJ.RY0402.140152_1 LMJ.RY0402.140152 3'UTR 73 5.5
LMJ.RY0402.244483_1 LMJ.RY0402.244483 3'UTR 95 5.5
LMJ.RY0402.244483_2 LMJ.RY0402.244483 3'UTR 95 5.5

Gene Annotations

PFAM:PF04564
PANTHER:
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::GO:0004842, GO:0016567
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Carbon concentrating mechanism, screen 8 of 11 ( 90% confidence (FDR = 0.1))
Carbon concentrating mechanism, screen 9 of 11 ( 87% confidence (FDR = 0.13))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.