Insertion junction: CLIP2.058568_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058568
Chromosome:chromosome 6
Location:6292589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292650 ROC93 (1 of 3) K06236 - collagen, type I/II/III/V/XI/XXIV/XXVII, alpha (COL1AS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGAAAGTTTCGTGGGGCGGGTTGCCACATCCTGGGCGCATTGGGTTT
Internal bar code:TCCGAAATTTGGTTTGAATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1583
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CACGAGTTTGCGCAACTGAA
Suggested primer 2:GCCAGCAATGCCAAGATAGC