Insertion junction: CLIP2.058635_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058635
Chromosome:chromosome 8
Location:1987002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g368450 (1 of 1) K12667 - oligosaccharyltransferase complex subunit delta (ribophorin II) (SWP1, RPN2) 5'UTR
Cre08.g368500 (1 of 1) K14838 - nucleolar protein 15 (NOP15) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGGCGCATCGCCAGCTAACCCGCTTCTGCAACGCCTTCCACGATATT
Internal bar code:GAAGTATCAATTAAAGCGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1970
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGCTGCGGCAAAAGAA
Suggested primer 2:TACAGTGCAACGCTCGAAGT