Gene: Cre08.g368450
Overview
| Common name: | |
| Defline: | (1 of 1) K12667 - oligosaccharyltransferase complex subunit delta (ribophorin II) (SWP1, RPN2) |
| Description: | |
| Synonyms: | g8635.t1,Cre08.g368450.t1.1 |
| Chromosome: | chromosome 8 |
Protein Localization
A plasmid for expressing Cre08.g368450 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre08.g368450-Venus-3xFLAG
Imaged strain: CSI_LW10H5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
secretory pathway/endoplasmic reticulum
shapes in cytoplasm/one large patch in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.058635_1 | CLIP2.058635 | 5'UTR | 80 | 6.1 |
| CLIP2.058635_2 | CLIP2.058635 | 5'UTR | 80 | 6.1 |
| CLIP2.072356_1 | CLIP2.072356 | 3'UTR | 80 | 6.1 |
| CLIP2.072356_2 | CLIP2.072356 | 3'UTR | 80 | 6.1 |
| CLIP2.076213_1 | CLIP2.076213 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.228119_1 | LMJ.RY0402.228119 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.228119_2 | LMJ.RY0402.228119 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.228119_3 | LMJ.RY0402.228119 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF05817 |
| PANTHER: | PTHR12640 PTHR12640:SF0 |
| KEGG_ec: | EC:2.4.99.18 |
| KEGG_orthology: | K12667 |
| KOG: | KOG2447 |
| Gene ontology terms:: | GO:0006487, GO:0008250, GO:0016021 |
| Best arabidopsis TAIR name: | AT4G21150.1 |
| Best arabidopsis TAIR symbol: | HAP6 |
| Best arabidopsis TAIR defline: | ribophorin II (RPN2) family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.