Insertion junction: CLIP2.058696_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058696
Chromosome:chromosome 9
Location:6637695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416400 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGTGACTGATGGTCGGGGTGGACCGGTGGAGCAGCACCGCGCGCCC
Internal bar code:AAAAAGTTAACATCCTTCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1022
LEAP-Seq percent confirming:79.4118
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTTGACAACTGTGCTG
Suggested primer 2:CTTGCTGATGCGCATTCCTC