Insertion junction: CLIP2.058840_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058840
Chromosome:chromosome 10
Location:1301952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427150 SPL16 (1 of 1) K12870 - pre-mRNA-splicing factor ISY1 (ISY1); Pre-mRNA splicing factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCGGGACCCCCCTTGAGGGGACGACCGACCCCCCGACGGACAAAACC
Internal bar code:ACGGGGAAGAACTGGATTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2452
LEAP-Seq percent confirming:88.0239
LEAP-Seq n confirming:147
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:167

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGCTTGCGTTTGATG
Suggested primer 2:TGTGGAGTGGGTGTCGAATG