Common name: | SPL16 |
Defline: | (1 of 1) K12870 - pre-mRNA-splicing factor ISY1 (ISY1); Pre-mRNA splicing factor |
Description: | Isy1-like splicing family protein, involved in optimizing splicing |
Synonyms: | g10553.t1,SPL16,Cre10.g427150.t1.1 |
Chromosome: | chromosome 10 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
---|---|---|---|---|
CLIP2.011583_1 | CLIP2.011583 | CDS | 80 | 6.1 |
CLIP2.058840_1 | CLIP2.058840 | 3'UTR | 80 | 6.1 |
CLIP2.058840_2 | CLIP2.058840 | 3'UTR | 80 | 6.1 |
CLIP2.059987_1 | CLIP2.059987 | 3'UTR | 80 | 6.1 |
CLIP2.059987_2 | CLIP2.059987 | 3'UTR | 80 | 6.1 |
CLIP2.060329_1 | CLIP2.060329 | 3'UTR | 80 | 6.1 |
CLIP2.060329_2 | CLIP2.060329 | 3'UTR | 80 | 6.1 |
CLIP2.062873_1 | CLIP2.062873 | CDS | 63 | 6.1 |
CLIP2.067713_1 | CLIP2.067713 | 3'UTR | 80 | 6.1 |
CLIP2.068578_3 | CLIP2.068578 | 3'UTR | 80 | 6.1 |
LMJ.RY0402.139413_2 | LMJ.RY0402.139413 | CDS | 58 | 5.5 |
LMJ.RY0402.254353_3 | LMJ.RY0402.254353 | 3'UTR | 58 | 5.5 |
PFAM: | PF06246 |
PANTHER: | PTHR13021 PTHR13021:SF8 |
KEGG_ec: | |
KEGG_orthology: | K12870 |
KOG: | KOG3068 |
Gene ontology terms:: | |
Best arabidopsis TAIR name: | AT3G18790 |
Best arabidopsis TAIR symbol: | |
Best arabidopsis TAIR defline: | (1 of 1) KOG3068 - mRNA splicing factor |
Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.