Insertion junction: CLIP2.067713_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067713
Chromosome:chromosome 10
Location:1301955
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427150 SPL16 (1 of 1) K12870 - pre-mRNA-splicing factor ISY1 (ISY1); Pre-mRNA splicing factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCCCGGGACCCCCCTTGAGGGGACGACCGACCCCCCGACGGACAAA
Internal bar code:TTGTACGGGATATGGTTTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1195
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGCTTGCGTTTGATG
Suggested primer 2:TGTGGAGTGGGTGTCGAATG