Insertion junction: CLIP2.068578_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068578
Chromosome:chromosome 10
Location:1301963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427150 SPL16 (1 of 1) K12870 - pre-mRNA-splicing factor ISY1 (ISY1); Pre-mRNA splicing factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCCGAAATCCCCCGGGACCCCCCTTGAGGGGACGACCGACCCCCCGA
Internal bar code:CAGCTGTTATATATCATTGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2267
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGCTTGCGTTTGATG
Suggested primer 2:TGTGGAGTGGGTGTCGAATG