Insertion junction: CLIP2.058840_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058840
Chromosome:chromosome 10
Location:1301956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427150 SPL16 (1 of 1) K12870 - pre-mRNA-splicing factor ISY1 (ISY1); Pre-mRNA splicing factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGCATGGGGTCTGGCACTTTGTTTCCTACCCCCCCCCTGGCAGATGG
Internal bar code:ACGGGGAAGAACTGGATTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:786
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGAGTGGGTGTCGAATG
Suggested primer 2:TGTGGTGCTTGCGTTTGATG